STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_7G007810Aldo_ket_red domain-containing protein. (310 aa)    
Predicted Functional Partners:
Csa_4G094000
UDP-glucose 6-dehydrogenase.
     
 0.667
Csa_1G012150
UDP-glucose 6-dehydrogenase.
     
 0.667
Csa_6G366400
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
      
 0.633
Csa_3G168970
Dihydrolipoyl dehydrogenase.
   
 
 0.582
PPC3
Uncharacterized protein.
      
 0.482
Csa_1G031740
Aldo_ket_red domain-containing protein.
  
0.470
Csa_5G601570
PKS_ER domain-containing protein.
  
  
 0.450
ppc2
Phosphoenolpyruvate carboxylase protein.
      
 0.446
ppc1
Phosphoenolpyruvate carboxylase protein.
      
 0.446
Csa_6G524050
Uncharacterized protein.
      
 0.444
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.