Csa_7G031590 protein (Cucumis sativus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Csa_7G031590

Uncharacterized protein. (879 aa)

Predicted Functional Partners:

Csa_3G636990

0.786

Csa_6G305300

0.683

Csa_3G151390

0.683

Csa_3G824760

0.646

Csa_1G587400

0.599

Csa_2G248730

0.598

Csa_3G146500

0.552

Csa_3G121620

0.549

Csa_1G050500

0.542

Csa_6G483490

0.537

Your Current Organism:

Cucumis sativus

NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Csa_1G050500	Csa_1G587400	A0A0A0LWP2	A0A0A0LYU5	CMP/dCMP-type deaminase domain-containing protein.	Uncharacterized protein.	0.662
Csa_1G050500	Csa_2G248730	A0A0A0LWP2	A0A0A0LPA5	CMP/dCMP-type deaminase domain-containing protein.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.996
Csa_1G050500	Csa_6G483490	A0A0A0LWP2	A0A0A0KHT3	CMP/dCMP-type deaminase domain-containing protein.	AA_kinase domain-containing protein.	0.662
Csa_1G050500	Csa_7G031590	A0A0A0LWP2	A0A0A0K1R5	CMP/dCMP-type deaminase domain-containing protein.	Uncharacterized protein.	0.542
Csa_1G587400	Csa_1G050500	A0A0A0LYU5	A0A0A0LWP2	Uncharacterized protein.	CMP/dCMP-type deaminase domain-containing protein.	0.662
Csa_1G587400	Csa_2G248730	A0A0A0LYU5	A0A0A0LPA5	Uncharacterized protein.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.933
Csa_1G587400	Csa_6G483490	A0A0A0LYU5	A0A0A0KHT3	Uncharacterized protein.	AA_kinase domain-containing protein.	0.770
Csa_1G587400	Csa_7G031590	A0A0A0LYU5	A0A0A0K1R5	Uncharacterized protein.	Uncharacterized protein.	0.599
Csa_2G248730	Csa_1G050500	A0A0A0LPA5	A0A0A0LWP2	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	CMP/dCMP-type deaminase domain-containing protein.	0.996
Csa_2G248730	Csa_1G587400	A0A0A0LPA5	A0A0A0LYU5	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	Uncharacterized protein.	0.933
Csa_2G248730	Csa_3G121620	A0A0A0LPA5	A0A0A0L8S3	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	2-Hacid_dh_C domain-containing protein.	0.885
Csa_2G248730	Csa_6G483490	A0A0A0LPA5	A0A0A0KHT3	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	AA_kinase domain-containing protein.	0.690
Csa_2G248730	Csa_7G031590	A0A0A0LPA5	A0A0A0K1R5	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	Uncharacterized protein.	0.598
Csa_3G121620	Csa_2G248730	A0A0A0L8S3	A0A0A0LPA5	2-Hacid_dh_C domain-containing protein.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.885
Csa_3G121620	Csa_7G031590	A0A0A0L8S3	A0A0A0K1R5	2-Hacid_dh_C domain-containing protein.	Uncharacterized protein.	0.549
Csa_3G146500	Csa_3G151390	A0A0A0L7G3	A0A0A0L8X3	Uncharacterized protein.	Uncharacterized protein.	0.891
Csa_3G146500	Csa_6G305300	A0A0A0L7G3	A0A0A0KG41	Uncharacterized protein.	Uncharacterized protein.	0.891
Csa_3G146500	Csa_7G031590	A0A0A0L7G3	A0A0A0K1R5	Uncharacterized protein.	Uncharacterized protein.	0.552
Csa_3G151390	Csa_3G146500	A0A0A0L8X3	A0A0A0L7G3	Uncharacterized protein.	Uncharacterized protein.	0.891
Csa_3G151390	Csa_3G636990	A0A0A0L8X3	A0A0A0LE76	Uncharacterized protein.	NmrA domain-containing protein.	0.436