STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_7G412860Uncharacterized protein. (772 aa)    
Predicted Functional Partners:
Csa_1G050450
Uncharacterized protein.
    
   0.911
Csa_6G013880
Uncharacterized protein.
    
 0.757
Csa_7G073400
Cysteine protease; Belongs to the peptidase C1 family.
    
   0.736
Csa_4G014080
Pept_C1 domain-containing protein.
    
   0.736
Csa_4G015170
Pept_C1 domain-containing protein.
    
   0.736
Csa_4G641600
Uncharacterized protein; Belongs to the peptidase C1 family.
    
   0.736
Csa_2G362510
Uncharacterized protein; Belongs to the peptidase C1 family.
    
   0.736
Csa_6G077380
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.726
Csa_2G150510
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.726
Csa_1G268290
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.626
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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