STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_7G432450Uncharacterized protein. (284 aa)    
Predicted Functional Partners:
Csa_1G009830
Uncharacterized protein.
  
  
 0.642
Csa_7G431990
Uncharacterized protein.
  
  
 0.641
Csa_1G408730
PAS_2 domain-containing protein.
  
     0.526
Csa_4G372090
Uncharacterized protein.
  
     0.524
Csa_3G734100
Uncharacterized protein.
  
    0.524
Csa_3G625630
TPR_REGION domain-containing protein.
  
     0.523
Csa_2G139290
X8 domain-containing protein.
  
     0.520
Csa_4G652830
Uncharacterized protein.
  
     0.514
Csa_6G525240
LOB domain-containing protein.
  
     0.513
Csa_1G088440
LOB domain-containing protein.
  
     0.512
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.