STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_7G056500Phloem protein 2. (174 aa)    
Predicted Functional Partners:
Csa_4G193250
NAC domain-containing protein.
      
 0.667
XSP30
Uncharacterized protein.
      
 0.667
Csa_1G267240
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
      
 0.666
Csa_2G008760
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
      
 0.665
Csa_7G037560
Uncharacterized protein.
      
 0.662
Csa_5G244150
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
      
 0.662
Csa_6G040650
rRNA N-glycosidase.
      
 0.660
Csa_5G428440
rRNA N-glycosidase.
      
 0.660
Csa_6G176410
Tr-type G domain-containing protein.
      
 0.622
Csa_1G056960
Uncharacterized protein.
     
 0.585
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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