STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_7G414510Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (328 aa)    
Predicted Functional Partners:
Csa_2G299950
Cinnamyl alcohol dehydrogenase-like protein.
     
 0.877
Csa_2G300950
PKS_ER domain-containing protein.
     
 0.877
Csa_1G690240
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
    
 0.676
Csa_1G537500
BBE domain-containing protein.
   
  0.660
Csa_1G537505
BBE domain-containing protein.
   
  0.660
Csa_4G091880
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
   
 
  0.655
Csa_3G047740
Methyltransf_2 domain-containing protein.
   
 
  0.655
Csa_3G046220
Methyltransf_2 domain-containing protein.
   
 
  0.655
Csa_3G046230
O-methyltransferase-like protein.
   
 
  0.655
Csa_6G501940
Uncharacterized protein.
     
  0.650
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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