STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_6G008010ANK_REP_REGION domain-containing protein. (753 aa)    
Predicted Functional Partners:
Csa_2G010200
ANK_REP_REGION domain-containing protein.
  
   
 0.805
Csa_2G350430
Ankyrin repeat-containing protein.
  
   
 0.791
Csa_6G363020
ANK_REP_REGION domain-containing protein.
  
   
 0.744
Csa_3G457650
ANK_REP_REGION domain-containing protein.
      
 0.663
Csa_3G696850
ANK_REP_REGION domain-containing protein.
      
 0.663
Csa_1G058080
ANK_REP_REGION domain-containing protein.
      
 0.663
Csa_1G058660
ANK_REP_REGION domain-containing protein.
      
 0.663
Csa_1G058090
Uncharacterized protein.
      
 0.663
Csa_1G058160
ANK_REP_REGION domain-containing protein.
      
 0.663
Csa_1G058110
Uncharacterized protein.
      
 0.663
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.