STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_7G396330Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
Csa_3G646550
Lipase_GDSL domain-containing protein; Belongs to the 'GDSL' lipolytic enzyme family.
      
 0.717
Csa_7G405310
Endoglucanase.
      
 0.689
Csa_2G296120
Lipase_GDSL domain-containing protein; Belongs to the 'GDSL' lipolytic enzyme family.
      
 0.663
Csa_5G633150
ZnMc domain-containing protein.
      
 0.628
Csa_4G443120
LigB domain-containing protein.
      
 0.623
Csa_7G072740
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.578
Csa_3G838140
Uncharacterized protein.
      
 0.574
Csa_6G525660
Reticuline oxidase.
      
 0.557
Csa_2G032730
F-box domain-containing protein.
      
 0.550
Csa_2G032230
F-box domain-containing protein.
      
 0.550
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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