STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_7G396380Uncharacterized protein. (411 aa)    
Predicted Functional Partners:
Csa_5G522950
GHMP_kinases_N domain-containing protein.
      
 0.663
Csa_2G037230
UDP-glucuronate 5-epimerase.
   
  
 0.554
Csa_1G277970
Epimerase domain-containing protein.
   
  
 0.554
Csa_3G180220
PKS_ER domain-containing protein.
      
 0.534
Csa_6G525490
AMP-binding domain-containing protein.
    
 
 0.465
Csa_7G450770
Cell wall invertase 5; Belongs to the glycosyl hydrolase 32 family.
      
 0.447
Csa_7G450780
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
      
 0.447
Csa_5G174590
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
      
 0.447
Csa_4G646140
Cell wall invertase 1; Belongs to the glycosyl hydrolase 32 family.
      
 0.447
Csa_3G777580
Cell wall invertase 3; Belongs to the glycosyl hydrolase 32 family.
      
 0.447
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.