STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_6G501350Uncharacterized protein; Belongs to the cytochrome P450 family. (498 aa)    
Predicted Functional Partners:
Csa_4G336250
N-acetyltransferase domain-containing protein.
      
 0.780
Csa_3G611340
Uncharacterized protein.
   
  
 0.780
Csa_4G091880
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
      
 0.637
Csa_5G606840
Uncharacterized protein.
  
  
  0.517
Csa_5G606830
Uncharacterized protein.
  
  
  0.512
Csa_1G595860
Uncharacterized protein.
  
  
  0.512
Csa_3G855360
Uncharacterized protein.
  
  
  0.510
Csa_5G606820
Cytochrome P450.
  
  
  0.509
Csa_3G855350
Uncharacterized protein.
  
  
  0.504
Csa_3G182180
Uncharacterized protein.
  
  
  0.503
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.