Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Csa_1G086920 | Csa_3G736800 | A0A0A0LUR9 | A0A0A0LDW7 | Uncharacterized protein. | HECT domain-containing protein. | 0.440 |
Csa_1G086920 | Csa_6G517350 | A0A0A0LUR9 | A0A0A0KLH0 | Uncharacterized protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.739 |
Csa_1G086920 | Csa_7G339130 | A0A0A0LUR9 | A0A0A0K4I8 | Uncharacterized protein. | Uncharacterized protein. | 0.438 |
Csa_2G270730 | Csa_3G734220 | A0A0A0LPP5 | A0A0A0LD61 | HECT domain-containing protein. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.999 |
Csa_2G270730 | Csa_3G736800 | A0A0A0LPP5 | A0A0A0LDW7 | HECT domain-containing protein. | HECT domain-containing protein. | 0.906 |
Csa_2G270730 | Csa_5G623910 | A0A0A0LPP5 | A0A0A0KRU3 | HECT domain-containing protein. | Uncharacterized protein. | 0.445 |
Csa_2G270730 | Csa_6G181590 | A0A0A0LPP5 | A0A0A0KE12 | HECT domain-containing protein. | Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family. | 0.921 |
Csa_2G270730 | Csa_6G430710 | A0A0A0LPP5 | A0A0A0KEJ0 | HECT domain-containing protein. | Uncharacterized protein. | 0.445 |
Csa_2G270730 | Csa_6G517350 | A0A0A0LPP5 | A0A0A0KLH0 | HECT domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.831 |
Csa_2G270730 | Csa_7G339130 | A0A0A0LPP5 | A0A0A0K4I8 | HECT domain-containing protein. | Uncharacterized protein. | 0.721 |
Csa_3G734220 | Csa_2G270730 | A0A0A0LD61 | A0A0A0LPP5 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | HECT domain-containing protein. | 0.999 |
Csa_3G734220 | Csa_3G736800 | A0A0A0LD61 | A0A0A0LDW7 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | HECT domain-containing protein. | 0.999 |
Csa_3G734220 | Csa_5G623910 | A0A0A0LD61 | A0A0A0KRU3 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Uncharacterized protein. | 0.515 |
Csa_3G734220 | Csa_6G181590 | A0A0A0LD61 | A0A0A0KE12 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family. | 0.755 |
Csa_3G734220 | Csa_6G430710 | A0A0A0LD61 | A0A0A0KEJ0 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Uncharacterized protein. | 0.515 |
Csa_3G734220 | Csa_6G517350 | A0A0A0LD61 | A0A0A0KLH0 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.706 |
Csa_3G734220 | Csa_7G339130 | A0A0A0LD61 | A0A0A0K4I8 | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | Uncharacterized protein. | 0.814 |
Csa_3G736800 | Csa_1G086920 | A0A0A0LDW7 | A0A0A0LUR9 | HECT domain-containing protein. | Uncharacterized protein. | 0.440 |
Csa_3G736800 | Csa_2G270730 | A0A0A0LDW7 | A0A0A0LPP5 | HECT domain-containing protein. | HECT domain-containing protein. | 0.906 |
Csa_3G736800 | Csa_3G734220 | A0A0A0LDW7 | A0A0A0LD61 | HECT domain-containing protein. | E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. | 0.999 |
page 1 of 3