STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_5G190440Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
Csa_5G623590
Uncharacterized protein.
      
 0.536
Csa_3G851920
Foie-gras_1 domain-containing protein.
  
     0.521
Csa_5G589970
Nup54 domain-containing protein.
  
     0.495
Csa_1G604060
Uncharacterized protein.
  
     0.473
Csa_1G009830
Uncharacterized protein.
  
     0.464
Csa_4G310720
A_deaminase domain-containing protein.
      
 0.461
Csa_4G358740
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
  
   
 0.459
Csa_6G005140
EGF-like domain-containing protein.
  
     0.448
Csa_1G166780
Uncharacterized protein.
  
     0.441
Csa_5G522980
CRM domain-containing protein.
  
     0.439
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.