STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_5G182050CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (204 aa)    
Predicted Functional Partners:
Csa_5G636650
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
      
 0.549
Csa_1G629150
CASP_C domain-containing protein.
      
 0.548
Csa_6G361330
AP2/ERF domain-containing protein.
      
 0.542
Csa_3G816670
Uncharacterized protein.
  
     0.532
Csa_4G048010
Uncharacterized protein.
  
     0.523
Csa_6G524690
Uncharacterized protein.
  
     0.509
Csa_3G895890
Uncharacterized protein.
  
     0.508
Csa_1G467080
Uncharacterized protein.
  
     0.507
Csa_1G025240
Uncharacterized protein.
  
     0.507
Csa_6G495690
Uncharacterized protein.
  
     0.500
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.