Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Csa_5G172870Protein kinase domain-containing protein. (963 aa)    
Predicted Functional Partners:
Csa_6G271450
Uncharacterized protein.
   
 
 0.797
Csa_3G253490
WD_REPEATS_REGION domain-containing protein.
   
 
 0.733
TTG1
WD-repeat protein.
   
 
 0.701
Csa_7G070760
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
  
 0.633
Csa_2G418950
Uncharacterized protein.
    
   0.535
Csa_2G428410
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.535
Csa_1G660130
Uncharacterized protein.
    
   0.535
Csa_3G695850
Uncharacterized protein.
    
 
 0.532
Csa_2G012730
Xpo1 domain-containing protein.
    
 
 0.523
Csa_5G633180
Uncharacterized protein.
      
 0.517
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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