STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_5G524850L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (706 aa)    
Predicted Functional Partners:
Csa_7G268510
Uncharacterized protein.
  
 0.985
Csa_3G815460
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
  
 0.984
Csa_4G028980
4Fe-4S ferredoxin-type domain-containing protein.
  
 0.983
Csa_3G595230
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.983
Csa_7G429590
Citrate synthase; Belongs to the citrate synthase family.
  
 0.970
Csa_6G169340
Citrate synthase.
  
 0.970
Csa_5G181450
Transket_pyr domain-containing protein.
  
 0.968
Csa_5G512860
Transket_pyr domain-containing protein.
  
 0.968
Csa_6G362950
Ligase_CoA domain-containing protein.
  
 0.959
Csa_6G331010
Ligase_CoA domain-containing protein.
  
 0.959
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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