STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_5G346540Uncharacterized protein. (157 aa)    
Predicted Functional Partners:
Csa_3G636410
G-patch domain-containing protein.
   
   0.872
Csa_6G514910
Uncharacterized protein.
    
 
 0.866
Csa_6G495630
Uncharacterized protein.
    
 
 0.865
Csa_7G432440
MPN domain-containing protein.
    
   0.864
Csa_6G382870
Uncharacterized protein.
    
   0.864
Csa_6G452700
Small nuclear ribonucleoprotein G.
    
   0.864
Csa_6G430680
RRM domain-containing protein.
    
   0.864
Csa_4G046730
Small nuclear ribonucleoprotein Sm D2.
    
   0.864
Csa_4G110070
TOG domain-containing protein.
    
   0.864
Csa_4G308540
Uncharacterized protein.
    
   0.864
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.