STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_5G645170Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
Csa_5G522950
GHMP_kinases_N domain-containing protein.
     
  0.800
Csa_4G098720
Uncharacterized protein.
     
  0.800
Csa_3G816160
Alpha-L-AF_C domain-containing protein.
     
 0.800
Csa_2G100000
Aldo_ket_red domain-containing protein.
     
  0.800
Csa_1G434140
Uncharacterized protein.
     
  0.800
Csa_3G629740
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
  
  
 
0.690
Csa_4G025750
Uncharacterized protein.
  
  
 
0.673
Csa_7G427620
Uncharacterized protein.
  
  
 
0.670
Csa_3G838140
Uncharacterized protein.
  
  
 
0.670
Csa_4G004940
Uncharacterized protein.
  
  
 
0.668
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.