STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_4G064000PH domain-containing protein. (487 aa)    
Predicted Functional Partners:
Csa_4G572320
SH3 domain-containing protein.
  
     0.500
Csa_3G081370
Chorein_N domain-containing protein.
  
     0.500
Csa_4G266940
Uncharacterized protein.
  
     0.496
Csa_3G236580
SAWADEE domain-containing protein.
  
     0.467
Csa_3G516480
Uncharacterized protein.
  
     0.454
Csa_2G336680
Uncharacterized protein.
  
     0.449
Csa_4G006230
DRBM domain-containing protein.
  
     0.446
Csa_6G407070
Uncharacterized protein.
  
     0.438
Csa_1G600970
C2H2-type domain-containing protein.
  
     0.434
Csa_4G056750
Uncharacterized protein; Belongs to the NPH3 family.
      
 0.429
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.