STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_4G015170Pept_C1 domain-containing protein. (71 aa)    
Predicted Functional Partners:
Csa_1G050450
Uncharacterized protein.
    
  0.961
Csa_3G731000
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.943
Csa_2G297130
OBG-type G domain-containing protein.
    
   0.943
Csa_7G429590
Citrate synthase; Belongs to the citrate synthase family.
   
   0.899
Csa_6G169340
Citrate synthase.
   
   0.899
Csa_2G301550
Uncharacterized protein.
    
  0.899
Csa_1G434690
Uncharacterized protein.
    
   0.898
Csa_1G435200
DNA_pol_E_B domain-containing protein.
    
   0.898
Csa_3G846030
OBG-type G domain-containing protein.
    
   0.894
Csa_6G495050
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.862
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.