STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G115080Uncharacterized protein. (294 aa)    
Predicted Functional Partners:
Csa_2G350450
Uncharacterized protein.
   
 
 0.974
Csa_1G005630
Uncharacterized protein.
   
 
 0.959
Csa_3G098540
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
  
   0.935
Csa_4G011700
L51_S25_CI-B8 domain-containing protein.
    
   0.931
Csa_6G487720
Uncharacterized protein.
  
 
 0.885
Csa_4G623380
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.885
Csa_6G078530
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.877
Csa_6G483480
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.877
Csa_3G727930
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.877
Csa_3G171140
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.877
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.