STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G179200LysM domain-containing protein. (120 aa)    
Predicted Functional Partners:
Csa_1G001470
Uncharacterized protein.
  
     0.533
Csa_2G406090
Uncharacterized protein.
  
     0.533
Csa_6G095300
Uncharacterized protein.
  
     0.532
Csa_2G406080
Uncharacterized protein.
  
     0.529
Csa_3G134890
CRIB domain-containing protein.
  
     0.527
Csa_5G152980
TIR domain-containing protein.
  
     0.520
Csa_4G286980
Lipoxygenase domain-containing protein.
  
     0.519
Csa_4G410800
Uncharacterized protein.
  
     0.517
Csa_2G406095
Uncharacterized protein.
  
     0.510
Csa_3G044470
AAA domain-containing protein.
  
     0.507
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.