STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G122510HTH myb-type domain-containing protein. (94 aa)    
Predicted Functional Partners:
Csa_7G419620
Uncharacterized protein.
  
    0.550
Csa_7G059160
Uncharacterized protein.
  
    0.549
Csa_6G445100
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
    0.549
Csa_3G824990
NAC domain-containing protein.
  
 
   0.545
Csa_4G193250
NAC domain-containing protein.
  
 
   0.544
Csa_3G644800
Cupin type-1 domain-containing protein.
  
    0.544
Csa_6G518170
NAC domain-containing protein 21/22.
  
     0.543
Csa_3G119670
Uncharacterized protein.
  
 
   0.543
Csa_4G286950
Lipoxygenase domain-containing protein.
  
     0.542
Csa_6G490160
GRAM domain-containing protein.
  
     0.540
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.