STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G386810Uncharacterized protein; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family. (479 aa)    
Predicted Functional Partners:
Csa_4G188670
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.805
Csa_4G188795
Helicase ATP-binding domain-containing protein.
   
 0.805
Csa_4G188732
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.805
Csa_3G730880
Uncharacterized protein.
   
 0.760
Csa_2G058700
RECA_2 domain-containing protein.
    
 0.709
Csa_5G289900
RECA_2 domain-containing protein.
   
 0.673
Csa_2G248730
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.658
Csa_3G126250
RECA_2 domain-containing protein.
   
 0.607
Csa_3G145750
Uncharacterized protein; Belongs to the RecA family.
   
 0.607
Csa_5G623550
ERCC4 domain-containing protein.
   
 0.584
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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