STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G396920LOB domain-containing protein. (243 aa)    
Predicted Functional Partners:
Csa_6G305300
Uncharacterized protein.
   
 0.551
Csa_3G151390
Uncharacterized protein.
   
 0.551
Csa_1G043190
GRAM domain-containing protein.
  
     0.523
Csa_1G013210
X8 domain-containing protein.
  
     0.509
Csa_5G577990
GRAM domain-containing protein.
  
     0.485
Csa_2G037260
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
  
 
   0.476
Csa_5G527900
ZF-HD dimerization-type domain-containing protein.
  
     0.474
Csa_3G860320
BZIP domain-containing protein.
  
 
  0.469
Csa_6G499130
Zinc finger homeodomain protein 1.
  
     0.454
Csa_6G124030
Uncharacterized protein.
  
 
  0.452
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.