STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G126850Uncharacterized protein. (310 aa)    
Predicted Functional Partners:
Csa_7G387800
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 0.997
Csa_2G367740
tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
 
 0.899
Csa_1G555080
Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family.
  
 0.883
Csa_1G173210
SAM-dependent MTase TRM10-type domain-containing protein.
   
 
 0.758
Csa_7G396460
Uncharacterized protein.
   
    0.727
Csa_1G050310
WD_REPEATS_REGION domain-containing protein.
   
    0.717
Csa_3G840410
SGF29 C-terminal domain-containing protein.
    
 
 0.693
Csa_2G074100
Uncharacterized protein.
    
 
 0.693
Csa_3G750370
Brix domain-containing protein.
   
  
 0.691
Csa_6G524090
Uncharacterized protein.
   
   0.680
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.