STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G229400Uncharacterized protein. (273 aa)    
Predicted Functional Partners:
Csa_6G087750
Ubiquitin-like domain-containing protein.
    
 0.735
Csa_3G902930
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.693
Csa_1G041560
Rhodanese domain-containing protein.
    
 0.685
Csa_7G397580
Uncharacterized protein.
   
 0.667
Csa_7G025180
CBF domain-containing protein.
   
  0.632
Csa_2G279240
WD_REPEATS_REGION domain-containing protein.
   
 0.605
Csa_3G228370
Helicase C-terminal domain-containing protein.
 
      0.598
Csa_6G087170
Sas10 domain-containing protein.
   
 0.597
Csa_2G385060
WD_REPEATS_REGION domain-containing protein.
   
 0.589
Csa_6G367110
Uncharacterized protein.
   
  0.573
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.