STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G187310TPR_REGION domain-containing protein. (265 aa)    
Predicted Functional Partners:
Csa_3G146500
Uncharacterized protein.
    
 0.573
Csa_4G506830
TPR_REGION domain-containing protein.
    
 0.571
Csa_1G039090
Uncharacterized protein.
    
 0.570
Csa_3G839820
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.568
Csa_5G208480
APC1_C domain-containing protein.
    
 0.566
Csa_7G452360
Uncharacterized protein.
    
 0.565
Csa_4G081270
ANAPC5 domain-containing protein.
    
 0.563
Csa_7G306890
RING-type domain-containing protein.
    
 0.561
Csa_6G305300
Uncharacterized protein.
    
 0.538
Csa_3G151390
Uncharacterized protein.
    
 0.538
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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