STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G144210Uncharacterized protein. (150 aa)    
Predicted Functional Partners:
Csa_5G168870
CP-type G domain-containing protein.
     
  0.650
Csa_3G000080
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.619
Csa_1G589750
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.579
Csa_2G021750
Protein kinase domain-containing protein.
    
 
 0.548
Csa_4G341560
Ef-hand calcium binding protein.
   
  
 0.544
Csa_3G748200
Uncharacterized protein.
   
 0.541
Csa_2G359910
Uncharacterized protein.
      
 0.538
Csa_7G066210
Peptidylprolyl isomerase.
   
 0.529
Csa_3G426900
PMD domain-containing protein.
   
 0.493
Csa_3G651720
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.477
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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