Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G889720Uncharacterized protein. (674 aa)    
Predicted Functional Partners:
Csa_2G010290
Uncharacterized protein.
    
 0.748
Csa_5G625990
DUF667 domain-containing protein.
    
   0.728
Csa_3G119680
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
   0.728
Csa_3G636970
Uncharacterized protein.
    
 
 0.718
Csa_7G062810
Protein kinase domain-containing protein.
    
 
 0.654
Csa_2G418950
Uncharacterized protein.
    
 0.653
Csa_1G660130
Uncharacterized protein.
    
 0.653
Csa_1G701220
Uncharacterized protein.
   
 
 0.649
Csa_6G430710
Uncharacterized protein.
    
 0.645
Csa_5G623910
Uncharacterized protein.
    
 0.645
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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