STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_3G912290PH domain-containing protein. (3944 aa)    
Predicted Functional Partners:
Csa_3G911780
Uncharacterized protein.
 
      0.846
Csa_6G486890
Spatacsin_C domain-containing protein.
  
  
 0.614
Csa_3G047920
Uncharacterized protein.
  
    0.557
Csa_2G285390
WD_REPEATS_REGION domain-containing protein.
  
     0.517
Csa_3G881560
Uncharacterized protein.
  
  
 0.505
Csa_4G022980
BP28CT domain-containing protein.
  
     0.439
Csa_2G263960
Uncharacterized protein.
  
     0.434
Csa_7G368130
Lipase_3 domain-containing protein.
  
     0.416
Csa_5G644570
Uncharacterized protein.
  
    0.415
Csa_7G379100
Uncharacterized protein.
  
 
 0.405
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.