STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_2G224300RING-type domain-containing protein. (430 aa)    
Predicted Functional Partners:
Csa_6G517990
RING-type domain-containing protein.
  
 
0.917
Csa_6G155540
RING-type domain-containing protein.
  
 
0.916
Csa_3G416130
WD_REPEATS_REGION domain-containing protein.
    
 0.702
Csa_6G448090
Rhodanese domain-containing protein.
    
 0.636
Csa_4G003700
Uncharacterized protein.
    
 0.627
Csa_2G279200
Uncharacterized protein.
    
 0.627
Csa_4G106850
Uncharacterized protein; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family.
    
 0.619
Csa_6G078540
Chromo domain-containing protein.
    
 0.602
Csa_3G126820
Chromo domain-containing protein.
    
 0.602
Csa_4G024050
VEFS-Box domain-containing protein.
    
 0.571
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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