Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Csa_2G009490Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (433 aa)    
Predicted Functional Partners:
Csa_6G151800
Sterile domain-containing protein.
      
 0.775
Csa_3G017070
Uncharacterized protein.
    
 0.760
Csa_3G912380
Uncharacterized protein.
    
 0.760
Csa_3G119560
Uncharacterized protein.
    
 0.759
Csa_3G239870
Uncharacterized protein.
    
 0.759
WRKY53
WRKY domain-containing protein.
      
 0.748
Csa_7G321550
ADH_N domain-containing protein.
      
 0.745
Csa_6G151810
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
      
 0.741
Csa_6G271450
Uncharacterized protein.
   
  0.732
Csa_3G848300
GMC_OxRdtase_N domain-containing protein.
      
 0.723
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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