STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_2G362420AAA domain-containing protein; Belongs to the AAA ATPase family. (398 aa)    
Predicted Functional Partners:
Csa_2G298260
PCI domain-containing protein.
   
 0.982
Csa_6G133730
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
0.977
Csa_6G190480
PCI domain-containing protein.
   
 0.977
Csa_7G431420
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
0.976
Csa_7G038690
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.973
Csa_3G006720
PCI domain-containing protein.
   
 0.972
Csa_3G732410
MPN domain-containing protein.
  
 0.971
Csa_4G639140
MPN domain-containing protein.
  
 0.970
Csa_4G054300
PCI domain-containing protein.
   
 0.968
Csa_2G070250
RPN13_C domain-containing protein.
   
 0.968
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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