Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Csa_2G377880LRRNT_2 domain-containing protein. (230 aa)    
Predicted Functional Partners:
Csa_5G604390
Protein kinase domain-containing protein.
  
 
   0.552
Csa_7G432340
Uncharacterized protein.
  
 
  0.542
Csa_5G013260
Uncharacterized protein.
  
 
   0.535
Csa_7G373520
LRRNT_2 domain-containing protein.
  
 
  0.532
Csa_3G734020
Uncharacterized protein.
  
 
  0.525
Csa_7G032260
Uncharacterized protein.
  
 
  0.518
Csa_2G356090
Uncharacterized protein.
  
     0.518
Csa_6G409900
LRRNT_2 domain-containing protein.
  
 
  0.511
Csa_7G050800
Uncharacterized protein.
  
 
  0.500
Csa_1G599490
Uncharacterized protein.
  
 
  0.492
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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