Csa_2G425790 protein (Cucumis sativus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

Csa_2G425790

Protein kinase domain-containing protein. (831 aa)

Predicted Functional Partners:

Csa_4G454660

0.484

Csa_2G236620

0.480

Csa_7G074880

0.477

Csa_3G017090

0.474

Csa_6G499740

0.470

Csa_4G453650

0.470

Csa_7G378450

0.465

Csa_7G065150

0.457

Csa_6G140790

0.456

Csa_6G439940

0.434

Your Current Organism:

Cucumis sativus

NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Csa_2G236620	Csa_2G425790	A0A0A0LP06	A0A0A0LR61	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.480
Csa_2G236620	Csa_6G140790	A0A0A0LP06	A0A0A0KGE2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.497
Csa_2G425790	Csa_2G236620	A0A0A0LR61	A0A0A0LP06	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.480
Csa_2G425790	Csa_3G017090	A0A0A0LR61	A0A0A0L1E4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.474
Csa_2G425790	Csa_4G453650	A0A0A0LR61	A0A0A0KYK0	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.470
Csa_2G425790	Csa_4G454660	A0A0A0LR61	A0A0A0KZ14	Protein kinase domain-containing protein.	Uncharacterized protein.	0.484
Csa_2G425790	Csa_6G140790	A0A0A0LR61	A0A0A0KGE2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.456
Csa_2G425790	Csa_6G439940	A0A0A0LR61	A0A0A0KF18	Protein kinase domain-containing protein.	Uncharacterized protein.	0.434
Csa_2G425790	Csa_6G499740	A0A0A0LR61	A0A0A0KG81	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.470
Csa_2G425790	Csa_7G065150	A0A0A0LR61	A0A0A0K7G3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.457
Csa_2G425790	Csa_7G074880	A0A0A0LR61	A0A0A0K2R4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.477
Csa_2G425790	Csa_7G378450	A0A0A0LR61	A0A0A0KAC2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.465
Csa_3G017090	Csa_2G425790	A0A0A0L1E4	A0A0A0LR61	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.474
Csa_3G017090	Csa_6G140790	A0A0A0L1E4	A0A0A0KGE2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.496
Csa_4G453650	Csa_2G425790	A0A0A0KYK0	A0A0A0LR61	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.470
Csa_4G453650	Csa_6G140790	A0A0A0KYK0	A0A0A0KGE2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.495
Csa_4G454660	Csa_2G425790	A0A0A0KZ14	A0A0A0LR61	Uncharacterized protein.	Protein kinase domain-containing protein.	0.484
Csa_4G454660	Csa_6G140790	A0A0A0KZ14	A0A0A0KGE2	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.506
Csa_6G140790	Csa_2G236620	A0A0A0KGE2	A0A0A0LP06	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.497
Csa_6G140790	Csa_2G425790	A0A0A0KGE2	A0A0A0LR61	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.456