Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Csa_1G169940LRRNT_2 domain-containing protein. (203 aa)    
Predicted Functional Partners:
Csa_5G013260
Uncharacterized protein.
  
 
  0.509
Csa_7G432340
Uncharacterized protein.
  
     0.504
Csa_5G168940
LRRNT_2 domain-containing protein.
  
 
  0.503
Csa_2G356090
Uncharacterized protein.
  
     0.495
Csa_2G377880
LRRNT_2 domain-containing protein.
  
 
  0.490
Csa_7G073410
Uncharacterized protein.
  
 
   0.489
Csa_5G168890
LRRNT_2 domain-containing protein.
  
 
  0.487
Csa_7G373520
LRRNT_2 domain-containing protein.
  
     0.485
Csa_6G091960
LRRNT_2 domain-containing protein.
  
     0.482
Csa_3G734020
Uncharacterized protein.
  
     0.482
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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