Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Csa_1G070620Uncharacterized protein. (640 aa)    
Predicted Functional Partners:
Csa_6G088100
Uncharacterized protein.
  
     0.470
Csa_7G394000
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.464
Csa_1G524140
Uncharacterized protein.
  
     0.460
Csa_1G042560
AAI domain-containing protein.
  
 
  0.445
Csa_3G698470
Uncharacterized protein.
    
 0.431
Csa_2G245470
BURP domain-containing protein.
  
 
  0.421
Csa_1G070580
Uncharacterized protein.
  
     0.420
Csa_6G319780
Uncharacterized protein.
  
     0.417
Csa_6G080310
Uncharacterized protein.
  
 
  0.415
Csa_5G169010
Uncharacterized protein.
  
     0.411
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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