STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_1G188680Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (291 aa)    
Predicted Functional Partners:
Csa_5G517210
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
      
 0.753
Csa_7G447990
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
   
  
 0.751
Csa_7G343850
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
   
  
 0.671
Csa_1G009640
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.667
Csa_4G538580
Uncharacterized protein.
    
 
 0.665
Csa_1G049960
Pectate lyase.
      
 0.539
Csa_6G011710
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.519
Csa_3G743400
Tonoplast intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.440
Csa_2G374630
Tonoplast intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.440
Csa_7G420730
PSII_BNR domain-containing protein.
    
 0.435
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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