STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GA2ox3GA 2-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (336 aa)    
Predicted Functional Partners:
GA3ox3
GA 3-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.777
ga20ox1
Gibberellin 20-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.753
Csa_1G408720
GRAS domain-containing protein; Belongs to the GRAS family.
      
 0.752
ga3ox1
Gibberellin 3-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.746
Csa_7G435470
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.726
Csa_7G435480
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.718
Csa_6G075200
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.707
Csa_3G179110
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.700
Csa_6G410650
Uncharacterized protein; Belongs to the terpene synthase family.
      
 0.699
ko
Ent-kaurene oxidase; Belongs to the cytochrome P450 family.
      
 0.699
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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