STRINGSTRING
XP_004134273.1 protein (Cucumis sativus) - STRING interaction network
"XP_004134273.1" - Uncharacterized protein in Cucumis sativus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_004134273.1Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 3 Proteins (358 aa)    
Predicted Functional Partners:
XP_004149323.1
EPIDERMAL PATTERNING FACTOR-like protein 9; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 11 ESTs (113 aa)
     
   
  0.639
XP_004173552.1
The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred complete CDS- deleted 1 base in 1 codon (461 aa)
           
  0.610
XP_004166310.1
Uncharacterized protein; Subtilisin-like protease SDD1-like (768 aa)
           
  0.535
XP_004152066.1
Subtilisin-like protease SDD1-like (770 aa)
           
  0.535
XP_004161487.1
Uncharacterized protein; Transcription factor bHLH60-like (369 aa)
           
  0.477
XP_004136583.1
Transcription factor bHLH60-like (369 aa)
           
  0.477
XP_004158073.1
The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred complete CDS- inserted 1 base in 1 codon (1061 aa)
           
  0.476
XP_004137111.1
Uncharacterized protein; Transcription factor bHLH95-like (297 aa)
           
  0.404
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus, Cucumis sativus L., cucumber, cucumbers
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