STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smed_0530Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (161 aa)    
Predicted Functional Partners:
Smed_1571
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
 
  
 0.920
Smed_1953
PFAM: Glutathione S-transferase domain; KEGG: sme:SMc04321 putative glutathione S-transferase protein.
  
 
  0.919
Smed_0573
PFAM: Glutathione S-transferase domain; KEGG: sme:SMc00097 putative glutathione S-transferase protein.
  
 
  0.918
Smed_3505
PFAM: Glutathione S-transferase domain; KEGG: sme:SMc00383 putative glutathione S-transferase protein.
  
 
  0.915
gshB
TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; KEGG: sme:SMc00419 probable glutathione synthetase protein; Belongs to the prokaryotic GSH synthase family.
     
 0.909
Smed_0571
PFAM: Glutathione S-transferase domain; KEGG: sme:SMc00036 putative glutathione S-transferase protein.
   
 
  0.901
Smed_0785
PFAM: Glutathione S-transferase domain; KEGG: sme:SMc00605 hypothetical zinc finger domain C2H2 type protein.
   
 
  0.901
Smed_2020
PFAM: Glutathione S-transferase domain; KEGG: sme:SMc01443 putative glutathione S-transferase protein.
   
 
  0.901
Smed_3120
PFAM: Glutathione S-transferase domain; KEGG: sme:SMc03882 putative glutathione S-transferase protein.
   
 
  0.901
Smed_3323
PFAM: Glutathione S-transferase domain; KEGG: sme:SMc04141 putative glutathione S-transferase protein.
   
 
  0.901
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
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