node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Smed_0878 | Smed_1219 | Smed_0878 | Smed_1219 | PFAM: metallophosphoesterase; KEGG: sme:SMc01909 hypothetical protein. | KEGG: rru:Rru_A0809 hypothetical protein. | 0.972 |
Smed_0878 | Smed_1305 | Smed_0878 | Smed_1305 | PFAM: metallophosphoesterase; KEGG: sme:SMc01909 hypothetical protein. | TIGRFAM: DNA polymerase LigD ligase region; PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: sme:SMb20912 putative ATP-dependent DNA ligase protein. | 0.520 |
Smed_0878 | Smed_2226 | Smed_0878 | Smed_2226 | PFAM: metallophosphoesterase; KEGG: sme:SMc01909 hypothetical protein. | TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sme:SMc01566 probable ATP-dependent DNA helicase protein. | 0.918 |
Smed_0878 | Smed_2631 | Smed_0878 | Smed_2631 | PFAM: metallophosphoesterase; KEGG: sme:SMc01909 hypothetical protein. | TIGRFAM: DNA ligase D; DNA ligase D 3'-phosphoesterase domain; DNA polymerase LigD polymerase domain; DNA polymerase LigD ligase region; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: sme:SMc03959 hypothetical protein. | 0.520 |
Smed_0878 | polA | Smed_0878 | Smed_3381 | PFAM: metallophosphoesterase; KEGG: sme:SMc01909 hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.990 |
Smed_0878 | recA | Smed_0878 | Smed_1522 | PFAM: metallophosphoesterase; KEGG: sme:SMc01909 hypothetical protein. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.800 |
Smed_0878 | topA | Smed_0878 | Smed_0932 | PFAM: metallophosphoesterase; KEGG: sme:SMc01909 hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.782 |
Smed_1217 | Smed_1218 | Smed_1217 | Smed_1218 | KEGG: vch:VCA0361 hypothetical protein. | KEGG: rru:Rru_A0810 hypothetical protein. | 0.709 |
Smed_1217 | Smed_1219 | Smed_1217 | Smed_1219 | KEGG: vch:VCA0361 hypothetical protein. | KEGG: rru:Rru_A0809 hypothetical protein. | 0.676 |
Smed_1217 | Smed_1220 | Smed_1217 | Smed_1220 | KEGG: vch:VCA0361 hypothetical protein. | PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03278 putative transposase number 1 for insertion sequence ISRM28. | 0.502 |
Smed_1218 | Smed_1217 | Smed_1218 | Smed_1217 | KEGG: rru:Rru_A0810 hypothetical protein. | KEGG: vch:VCA0361 hypothetical protein. | 0.709 |
Smed_1218 | Smed_1219 | Smed_1218 | Smed_1219 | KEGG: rru:Rru_A0810 hypothetical protein. | KEGG: rru:Rru_A0809 hypothetical protein. | 0.838 |
Smed_1218 | Smed_1220 | Smed_1218 | Smed_1220 | KEGG: rru:Rru_A0810 hypothetical protein. | PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03278 putative transposase number 1 for insertion sequence ISRM28. | 0.543 |
Smed_1219 | Smed_0878 | Smed_1219 | Smed_0878 | KEGG: rru:Rru_A0809 hypothetical protein. | PFAM: metallophosphoesterase; KEGG: sme:SMc01909 hypothetical protein. | 0.972 |
Smed_1219 | Smed_1217 | Smed_1219 | Smed_1217 | KEGG: rru:Rru_A0809 hypothetical protein. | KEGG: vch:VCA0361 hypothetical protein. | 0.676 |
Smed_1219 | Smed_1218 | Smed_1219 | Smed_1218 | KEGG: rru:Rru_A0809 hypothetical protein. | KEGG: rru:Rru_A0810 hypothetical protein. | 0.838 |
Smed_1219 | Smed_1220 | Smed_1219 | Smed_1220 | KEGG: rru:Rru_A0809 hypothetical protein. | PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03278 putative transposase number 1 for insertion sequence ISRM28. | 0.568 |
Smed_1219 | Smed_1305 | Smed_1219 | Smed_1305 | KEGG: rru:Rru_A0809 hypothetical protein. | TIGRFAM: DNA polymerase LigD ligase region; PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: sme:SMb20912 putative ATP-dependent DNA ligase protein. | 0.580 |
Smed_1219 | Smed_2226 | Smed_1219 | Smed_2226 | KEGG: rru:Rru_A0809 hypothetical protein. | TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sme:SMc01566 probable ATP-dependent DNA helicase protein. | 0.753 |
Smed_1219 | Smed_2631 | Smed_1219 | Smed_2631 | KEGG: rru:Rru_A0809 hypothetical protein. | TIGRFAM: DNA ligase D; DNA ligase D 3'-phosphoesterase domain; DNA polymerase LigD polymerase domain; DNA polymerase LigD ligase region; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: sme:SMc03959 hypothetical protein. | 0.580 |