STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
potA-2Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (355 aa)    
Predicted Functional Partners:
Smed_1717
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0328 spermidine/putrescine ABC transporter, permease protein, putative.
 
 
 0.961
Smed_1718
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1751 putative ABC transporter, permease protein.
  
 0.959
Smed_0756
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7677 ABC transporter, permease protein.
 
 
 0.805
Smed_2169
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01633 putative permease ABC transporter protein.
 
 
 0.796
Smed_0757
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7678 ABC transporter, permease protein.
  
 0.770
Smed_2170
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01634 putative permease ABC transporter protein.
 
  
 0.766
Smed_0312
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00772 probable putrescine transport system permease protein.
 
 
 0.764
Smed_1715
PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0855 hypothetical spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein.
 
  
 0.753
Smed_0313
Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00773 probable putrescine transport system permease protein.
 
  
 0.751
Smed_2406
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01963 putative spermidine/putrescine transport system permease ABC transporter protein.
 
  
 0.721
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
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