Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Smed_1781 | Smed_1782 | KEGG: sme:SMc04337 hypothetical protein. | KEGG: sme:SMc04339 hypothetical protein. | 0.884 |
Smed_1781 | Smed_1783 | KEGG: sme:SMc04337 hypothetical protein. | PFAM: methylenetetrahydrofolate reductase; KEGG: sme:SMc04340 putative oxidoreductase protein; Belongs to the methylenetetrahydrofolate reductase family. | 0.865 |
Smed_1781 | Smed_1784 | KEGG: sme:SMc04337 hypothetical protein. | PFAM: dihydropteroate synthase DHPS; KEGG: sme:SMc04342 hypothetical protein. | 0.886 |
Smed_1781 | Smed_1785 | KEGG: sme:SMc04337 hypothetical protein. | KEGG: sme:SMc04345 hypothetical protein. | 0.479 |
Smed_1781 | Smed_1786 | KEGG: sme:SMc04337 hypothetical protein. | PFAM: ferredoxin; KEGG: sme:SMc04347 hypothetical protein. | 0.885 |
Smed_1782 | Smed_1781 | KEGG: sme:SMc04339 hypothetical protein. | KEGG: sme:SMc04337 hypothetical protein. | 0.884 |
Smed_1782 | Smed_1783 | KEGG: sme:SMc04339 hypothetical protein. | PFAM: methylenetetrahydrofolate reductase; KEGG: sme:SMc04340 putative oxidoreductase protein; Belongs to the methylenetetrahydrofolate reductase family. | 0.982 |
Smed_1782 | Smed_1784 | KEGG: sme:SMc04339 hypothetical protein. | PFAM: dihydropteroate synthase DHPS; KEGG: sme:SMc04342 hypothetical protein. | 0.810 |
Smed_1782 | Smed_1785 | KEGG: sme:SMc04339 hypothetical protein. | KEGG: sme:SMc04345 hypothetical protein. | 0.479 |
Smed_1782 | Smed_1786 | KEGG: sme:SMc04339 hypothetical protein. | PFAM: ferredoxin; KEGG: sme:SMc04347 hypothetical protein. | 0.795 |
Smed_1783 | Smed_1781 | PFAM: methylenetetrahydrofolate reductase; KEGG: sme:SMc04340 putative oxidoreductase protein; Belongs to the methylenetetrahydrofolate reductase family. | KEGG: sme:SMc04337 hypothetical protein. | 0.865 |
Smed_1783 | Smed_1782 | PFAM: methylenetetrahydrofolate reductase; KEGG: sme:SMc04340 putative oxidoreductase protein; Belongs to the methylenetetrahydrofolate reductase family. | KEGG: sme:SMc04339 hypothetical protein. | 0.982 |
Smed_1783 | Smed_1784 | PFAM: methylenetetrahydrofolate reductase; KEGG: sme:SMc04340 putative oxidoreductase protein; Belongs to the methylenetetrahydrofolate reductase family. | PFAM: dihydropteroate synthase DHPS; KEGG: sme:SMc04342 hypothetical protein. | 0.845 |
Smed_1783 | Smed_1785 | PFAM: methylenetetrahydrofolate reductase; KEGG: sme:SMc04340 putative oxidoreductase protein; Belongs to the methylenetetrahydrofolate reductase family. | KEGG: sme:SMc04345 hypothetical protein. | 0.479 |
Smed_1783 | Smed_1786 | PFAM: methylenetetrahydrofolate reductase; KEGG: sme:SMc04340 putative oxidoreductase protein; Belongs to the methylenetetrahydrofolate reductase family. | PFAM: ferredoxin; KEGG: sme:SMc04347 hypothetical protein. | 0.777 |
Smed_1784 | Smed_1781 | PFAM: dihydropteroate synthase DHPS; KEGG: sme:SMc04342 hypothetical protein. | KEGG: sme:SMc04337 hypothetical protein. | 0.886 |
Smed_1784 | Smed_1782 | PFAM: dihydropteroate synthase DHPS; KEGG: sme:SMc04342 hypothetical protein. | KEGG: sme:SMc04339 hypothetical protein. | 0.810 |
Smed_1784 | Smed_1783 | PFAM: dihydropteroate synthase DHPS; KEGG: sme:SMc04342 hypothetical protein. | PFAM: methylenetetrahydrofolate reductase; KEGG: sme:SMc04340 putative oxidoreductase protein; Belongs to the methylenetetrahydrofolate reductase family. | 0.845 |
Smed_1784 | Smed_1785 | PFAM: dihydropteroate synthase DHPS; KEGG: sme:SMc04342 hypothetical protein. | KEGG: sme:SMc04345 hypothetical protein. | 0.779 |
Smed_1784 | Smed_1786 | PFAM: dihydropteroate synthase DHPS; KEGG: sme:SMc04342 hypothetical protein. | PFAM: ferredoxin; KEGG: sme:SMc04347 hypothetical protein. | 0.949 |
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