STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smed_1925TIGRFAM: phage recombination protein Bet; PFAM: RecT protein; KEGG: mlo:mll7977 hypothetical protein. (335 aa)    
Predicted Functional Partners:
Smed_1924
PFAM: siphovirus Gp157 family protein; KEGG: mlo:mll7978 hypothetical protein.
 
     0.950
Smed_1931
Hypothetical protein; KEGG: mag:amb2709 integrase; Belongs to the 'phage' integrase family.
 
     0.944
Smed_1930
Hypothetical protein.
       0.786
Smed_1926
KEGG: sit:TM1040_0782 hypothetical protein.
       0.785
Smed_1927
Hypothetical protein.
       0.783
Smed_1641
KEGG: rsp:RSP_2990 hypothetical protein.
  
     0.773
Smed_1874
KEGG: rsp:RSP_2990 hypothetical protein.
  
     0.773
Smed_1928
PFAM: protein of unknown function DUF1643; KEGG: sme:SMb20554 hypothetical protein.
       0.773
Smed_1929
Hypothetical protein.
       0.773
Smed_1880
KEGG: mes:Meso_1231 hypothetical protein.
  
     0.772
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.