Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Smed_1987 | Smed_1988 | KEGG: sme:SMc01490 hypothetical protein. | KEGG: sme:SMc01411 hypothetical protein. | 0.718 |
Smed_1987 | Smed_1989 | KEGG: sme:SMc01490 hypothetical protein. | PFAM: TfuA domain protein core; KEGG: sme:SMc01412 hypothetical protein. | 0.617 |
Smed_1987 | Smed_1990 | KEGG: sme:SMc01490 hypothetical protein. | PFAM: protein of unknown function DUF181; KEGG: sme:SMc01413 hypothetical protein. | 0.617 |
Smed_1987 | Smed_1991 | KEGG: sme:SMc01490 hypothetical protein. | SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc01491 conserved hypothetical protein. | 0.617 |
Smed_1987 | Smed_1992 | KEGG: sme:SMc01490 hypothetical protein. | Hypothetical protein. | 0.448 |
Smed_1988 | Smed_1987 | KEGG: sme:SMc01411 hypothetical protein. | KEGG: sme:SMc01490 hypothetical protein. | 0.718 |
Smed_1988 | Smed_1989 | KEGG: sme:SMc01411 hypothetical protein. | PFAM: TfuA domain protein core; KEGG: sme:SMc01412 hypothetical protein. | 0.685 |
Smed_1988 | Smed_1990 | KEGG: sme:SMc01411 hypothetical protein. | PFAM: protein of unknown function DUF181; KEGG: sme:SMc01413 hypothetical protein. | 0.679 |
Smed_1988 | Smed_1991 | KEGG: sme:SMc01411 hypothetical protein. | SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc01491 conserved hypothetical protein. | 0.730 |
Smed_1988 | Smed_1992 | KEGG: sme:SMc01411 hypothetical protein. | Hypothetical protein. | 0.480 |
Smed_1989 | Smed_1987 | PFAM: TfuA domain protein core; KEGG: sme:SMc01412 hypothetical protein. | KEGG: sme:SMc01490 hypothetical protein. | 0.617 |
Smed_1989 | Smed_1988 | PFAM: TfuA domain protein core; KEGG: sme:SMc01412 hypothetical protein. | KEGG: sme:SMc01411 hypothetical protein. | 0.685 |
Smed_1989 | Smed_1990 | PFAM: TfuA domain protein core; KEGG: sme:SMc01412 hypothetical protein. | PFAM: protein of unknown function DUF181; KEGG: sme:SMc01413 hypothetical protein. | 0.962 |
Smed_1989 | Smed_1991 | PFAM: TfuA domain protein core; KEGG: sme:SMc01412 hypothetical protein. | SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc01491 conserved hypothetical protein. | 0.906 |
Smed_1989 | Smed_1992 | PFAM: TfuA domain protein core; KEGG: sme:SMc01412 hypothetical protein. | Hypothetical protein. | 0.551 |
Smed_1989 | Smed_1993 | PFAM: TfuA domain protein core; KEGG: sme:SMc01412 hypothetical protein. | KEGG: sme:SMc01492 probable suppressor of E.coli rpoH thermosensitive mutation transmembrane protein. | 0.564 |
Smed_1990 | Smed_1987 | PFAM: protein of unknown function DUF181; KEGG: sme:SMc01413 hypothetical protein. | KEGG: sme:SMc01490 hypothetical protein. | 0.617 |
Smed_1990 | Smed_1988 | PFAM: protein of unknown function DUF181; KEGG: sme:SMc01413 hypothetical protein. | KEGG: sme:SMc01411 hypothetical protein. | 0.679 |
Smed_1990 | Smed_1989 | PFAM: protein of unknown function DUF181; KEGG: sme:SMc01413 hypothetical protein. | PFAM: TfuA domain protein core; KEGG: sme:SMc01412 hypothetical protein. | 0.962 |
Smed_1990 | Smed_1991 | PFAM: protein of unknown function DUF181; KEGG: sme:SMc01413 hypothetical protein. | SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc01491 conserved hypothetical protein. | 0.935 |
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