node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Smed_1037 | glyA | Smed_1037 | Smed_0816 | TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: sme:SMc01256 probable L-serine dehydratase protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.944 |
Smed_1037 | glyA-2 | Smed_1037 | Smed_2096 | TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: sme:SMc01256 probable L-serine dehydratase protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.944 |
Smed_1037 | ilvA | Smed_1037 | Smed_1373 | TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: sme:SMc01256 probable L-serine dehydratase protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.937 |
Smed_1037 | trpA | Smed_1037 | Smed_3238 | TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: sme:SMc01256 probable L-serine dehydratase protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.905 |
Smed_1037 | trpB | Smed_1037 | Smed_3237 | TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: sme:SMc01256 probable L-serine dehydratase protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.900 |
Smed_2295 | Smed_2685 | Smed_2295 | Smed_2685 | Anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; anthranilate synthase; PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sme:SMc02725 anthranilate synthase includes: glutamine amidotransferase protein. | TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: sme:SMc04013 putative para-aminobenzoate synthase component I protein. | 0.988 |
Smed_2295 | glyA | Smed_2295 | Smed_0816 | Anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; anthranilate synthase; PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sme:SMc02725 anthranilate synthase includes: glutamine amidotransferase protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.517 |
Smed_2295 | glyA-2 | Smed_2295 | Smed_2096 | Anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; anthranilate synthase; PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sme:SMc02725 anthranilate synthase includes: glutamine amidotransferase protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.517 |
Smed_2295 | ilvA | Smed_2295 | Smed_1373 | Anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; anthranilate synthase; PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sme:SMc02725 anthranilate synthase includes: glutamine amidotransferase protein. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.500 |
Smed_2295 | trpA | Smed_2295 | Smed_3238 | Anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; anthranilate synthase; PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sme:SMc02725 anthranilate synthase includes: glutamine amidotransferase protein. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.987 |
Smed_2295 | trpB | Smed_2295 | Smed_3237 | Anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; anthranilate synthase; PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sme:SMc02725 anthranilate synthase includes: glutamine amidotransferase protein. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.988 |
Smed_2295 | trpC | Smed_2295 | Smed_1409 | Anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; anthranilate synthase; PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sme:SMc02725 anthranilate synthase includes: glutamine amidotransferase protein. | PFAM: Indole-3-glycerol phosphate synthase; KEGG: sme:SMc00236 probable indole-3-glycerol phosphate synthase (IGPS) tryptophan biosynthesis lyase decarboxylase protein; Belongs to the TrpC family. | 0.999 |
Smed_2295 | trpD | Smed_2295 | Smed_1408 | Anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; anthranilate synthase; PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sme:SMc02725 anthranilate synthase includes: glutamine amidotransferase protein. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
Smed_2295 | trpF | Smed_2295 | Smed_3236 | Anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; anthranilate synthase; PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sme:SMc02725 anthranilate synthase includes: glutamine amidotransferase protein. | PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: sme:SMc02767 N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.986 |
Smed_2685 | Smed_2295 | Smed_2685 | Smed_2295 | TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: sme:SMc04013 putative para-aminobenzoate synthase component I protein. | Anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; anthranilate synthase; PFAM: glutamine amidotransferase class-I; Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sme:SMc02725 anthranilate synthase includes: glutamine amidotransferase protein. | 0.988 |
Smed_2685 | trpA | Smed_2685 | Smed_3238 | TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: sme:SMc04013 putative para-aminobenzoate synthase component I protein. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.948 |
Smed_2685 | trpB | Smed_2685 | Smed_3237 | TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: sme:SMc04013 putative para-aminobenzoate synthase component I protein. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.949 |
Smed_2685 | trpC | Smed_2685 | Smed_1409 | TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: sme:SMc04013 putative para-aminobenzoate synthase component I protein. | PFAM: Indole-3-glycerol phosphate synthase; KEGG: sme:SMc00236 probable indole-3-glycerol phosphate synthase (IGPS) tryptophan biosynthesis lyase decarboxylase protein; Belongs to the TrpC family. | 0.991 |
Smed_2685 | trpD | Smed_2685 | Smed_1408 | TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: sme:SMc04013 putative para-aminobenzoate synthase component I protein. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.987 |
Smed_2685 | trpF | Smed_2685 | Smed_3236 | TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: sme:SMc04013 putative para-aminobenzoate synthase component I protein. | PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: sme:SMc02767 N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. | 0.936 |