STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6UFW5LysM domain-containing protein. (407 aa)    
Predicted Functional Partners:
A0A1V6UCV1
Uncharacterized protein.
    
 0.666
A0A1V6V0E8
Uncharacterized protein.
    
 0.611
A0A1V6UE19
ANK_REP_REGION domain-containing protein.
    
  0.608
A0A1V6UZ73
Uncharacterized protein.
    
 0.600
A0A1V6UQW9
GOLD domain-containing protein.
    
 0.595
A0A1V6U7U9
ANK_REP_REGION domain-containing protein.
    
  0.580
A0A1V6UX81
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
   
 0.577
A0A1V6U8L4
Uncharacterized protein.
    
 0.556
A0A1V6UA46
Uncharacterized protein.
    
 0.556
A0A1V6UKD9
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.556
Your Current Organism:
Penicillium coprophilum
NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum
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