STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6UKF9Uncharacterized protein. (1330 aa)    
Predicted Functional Partners:
A0A1V6V6C8
DBF4-type domain-containing protein.
   
 
  0.750
A0A1V6V0K6
Spindle pole body component.
    
 0.742
A0A1V6UN48
Uncharacterized protein.
    
 0.722
A0A1V6UN80
Uncharacterized protein.
    
 0.722
A0A1V6UR45
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.692
A0A1V6UPF2
Spindle pole body component.
    
 0.639
A0A1V6URY5
Spindle pole body component.
    
 0.639
A0A1V6US41
Uncharacterized protein.
    
 0.639
A0A1V6USM6
Spindle pole body component.
    
 0.639
A0A1V6UA35
Nucleoside diphosphate kinase.
    
 0.634
Your Current Organism:
Penicillium coprophilum
NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum
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