STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6UP50U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (578 aa)    
Predicted Functional Partners:
A0A1V6V6A7
Uncharacterized protein.
   
 0.998
A0A1V6V9C9
Uncharacterized protein.
   
 
 0.992
A0A1V6V5X7
SF3b1 domain-containing protein.
   
 
 0.990
A0A1V6UKJ6
Uncharacterized protein.
   
 0.988
A0A1V6V9T4
WD_REPEATS_REGION domain-containing protein.
   
 0.988
A0A1V6UHP3
RRM domain-containing protein.
   
 0.985
A0A1V6UIJ2
Slu7 domain-containing protein.
    
 0.985
A0A1V6UX69
Uncharacterized protein.
   
 
 0.984
A0A1V6UYN7
Uncharacterized protein.
   
 0.979
A0A1V6V201
RRM domain-containing protein.
   
 0.971
Your Current Organism:
Penicillium coprophilum
NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.